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Comment:Added indices - true if corresponding sens fun to be generated.
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SHA3-256: cd2aed8b41a3588ee076f98f7bf7225fc1842118584f6bad7d69c3979d5a5a34
User & Date: gawthrop@users.sourceforge.net on 1999-09-18 04:20:44
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Context
1999-09-18
04:23:16
Initial revision check-in: 2062340c6f user: gawthrop@users.sourceforge.net tags: origin/master, trunk
04:20:44
Added indices - true if corresponding sens fun to be generated. check-in: cd2aed8b41 user: gawthrop@users.sourceforge.net tags: origin/master, trunk
1999-09-17
09:19:35
Added in_2 check-in: 348e9df598 user: gawthrop@users.sourceforge.net tags: origin/master, trunk
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Modified mttroot/mtt/bin/trans/m/mtt_stime.m from [5b7c3603ee] to [49ae0c3d81]. 

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function [t,y,y_theta] = mtt_ssimulate(system_name,theta);
  ## usage: [t,y,y_theta] = mtt_ssimulate(system_name,theta);
  ##
  ## Simulate system with name system_name and parameter vector theta
  ## The order of components in theta is determined in system_numpar.txt:
  ## y_theta contains the corresponding sensitivity functions
  ## Assumes system generated by the sBG approach
  ## Copyright (C) 1999 by Peter J. Gawthrop

  ## 	$Id$	

  ## Simulate using mtt-generated function










  y_theta = [];
   for i=1:length(theta)

     args="";
     for j=1:length(theta)
       i_sensitivity=(j==i);
       args = sprintf("%s%i %g ",args, i_sensitivity, theta(j));
     endfor

     command = sprintf("./%s_ode2odes.out %s > mtt_data.dat\n", system_name, args);
     system(command);

     ## Retrieve data
     load -force mtt_data.dat
     t = mtt_data(:,1);
     y = mtt_data(:,2);
     y_theta = [y_theta mtt_data(:,3)];

   endfor

endfunction




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function [t,y,y_theta] = mtt_stime(system_name,theta,indices);
  ## usage: [t,y,y_theta] = mtt_stime(system_name,theta);
  ##
  ## Simulate system with name system_name and parameter vector theta
  ## The order of components in theta is determined in system_numpar.txt:
  ## y_theta contains the corresponding sensitivity functions
  ## Assumes system generated by the sBG approach
  ## Copyright (C) 1999 by Peter J. Gawthrop

  ## 	$Id$	

  ## Simulate using mtt-generated function

  if nargin<3
    indices = ones(size(theta))
  endif
  
  N = length(theta);
  if N!=length(indices)
    error(sprintf("The length (%i) of indices must be the same as that of theta (%i)",length(indices),N));
  endif
  
  y_theta = [];
  for i=1:length(theta)
    if indices(i)
      args="";
      for j=1:length(theta)
	i_sensitivity=(j==i);
	args = sprintf("%s%i %g ",args, i_sensitivity, theta(j));
      endfor
      args
      command = sprintf("./%s_ode2odes.out %s > mtt_data.dat\n", system_name, args);
      system(command);

      ## Retrieve data
      load -force mtt_data.dat
      t = mtt_data(:,1);
      y = mtt_data(:,2);
      y_theta = [y_theta mtt_data(:,3)];
    endif
  endfor

endfunction

MTT: Model Transformation Tools
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