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Comment:5-port R for new stoichimetric form - integral only
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SHA3-256: 2145ae2fe99b808cd5d081c6c5244e1139af875bb62f7fed3f3e2cd354947fce
User & Date: gawthrop@users.sourceforge.net on 2015-08-11 22:55:00
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Context
2021-03-01
11:39:42
Cleanup repository after cvs2git conversion. check-in: af3953deae user: jeff@gridfinity.com tags: master, trunk
2015-08-11
22:55:00
5-port R for new stoichimetric form - integral only Leaf check-in: 2145ae2fe9 user: gawthrop@users.sourceforge.net tags: 5.0.2015.08.11, origin/master, trunk
2015-03-13
03:25:21
Use cp --force to ovewrite RCS locked files in MTT_work check-in: 140dec84c3 user: gawthrop@users.sourceforge.net tags: origin/master, trunk
Changes

Modified mttroot/mtt/lib/cr/r/MA.cr from [84249d695d] to [2731f4363e].

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%% Effort on port 2
FOR ALL A_1,A_2,A_3,A_4,v_1,v_2,v_3,v_4,kappa
LET MA(R,flow,kappa,effort,2,
   A_1,effort,1,	
   v_2,flow,2,
   v_3,flow,3,
   A_4,effort,4) = RT*log( (v_2/kappa) + exp(A_1/RT) );






























%% AE version
FOR ALL mu
LET MA(AE, effort,2, mu, effort,1) = exp(mu/RT);







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%% Effort on port 2
FOR ALL A_1,A_2,A_3,A_4,v_1,v_2,v_3,v_4,kappa
LET MA(R,flow,kappa,effort,2,
   A_1,effort,1,	
   v_2,flow,2,
   v_3,flow,3,
   A_4,effort,4) = RT*log( (v_2/kappa) + exp(A_1/RT) );

%%% Five port version (stoichiometric) with integral causality
%% Flow on port 1  = flow on port 3.
FOR ALL A_f, A_r, v_f, v_r, v, kappa
LET MA(R, flow,kappa,flow,1,	
   A_f,effort,1,	
   A_r,effort,2,
   v_f,flow,3,
   v_r,flow,4,
   v,effort,5) = v_f;

%% Flow on port 2  = flow on port 4.
FOR ALL A_f, A_r, v_f, v_r, v, kappa
LET MA(R, flow,kappa,flow,2,	
   A_f,effort,1,	
   A_r,effort,2,
   v_f,flow,3,
   v_r,flow,4,
   v,effort,5) = v_r;

%% Flow on port 5 is induced flow
FOR ALL A_f, A_r, v_f, v_r, v, kappa
LET MA(R, flow,kappa,flow,5,	
   A_f,effort,1,	
   A_r,effort,2,
   v_f,flow,3,
   v_r,flow,4,
   v,effort,5) = kappa*(exp(A_f/RT) - exp(A_r/RT));


%% AE version
FOR ALL mu
LET MA(AE, effort,2, mu, effort,1) = exp(mu/RT);


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