Index: mttroot/mtt/bin/mtt
==================================================================
--- mttroot/mtt/bin/mtt
+++ mttroot/mtt/bin/mtt
@@ -12,10 +12,13 @@
 ###############################################################
 ## Version control history
 ###############################################################
 ## $Header$
 ## $Log$
+## Revision 1.220  1999/12/17 03:17:57  peterg
+## reps_made is now $1_reps_made - stops clash between two reps per directory
+##
 ## Revision 1.219  1999/12/14 00:36:50  peterg
 ## Changed $source to $stdin and added to mtt_m2p arg list
 ##
 ## Revision 1.218  1999/12/03 00:04:50  peterg
 ## Version to eric.
@@ -745,11 +748,11 @@
 
 #Check $MTTPATH has been set
 mtt_check_var "$MTTPATH" "MTTPATH"
 
 #Version
-version='4.0--'
+version='4.0'
 
 # MTT recursion level is zero unless explicitly set
 level=0
 
 #Computation mode is octave by default
@@ -927,10 +930,11 @@
     echo '         -d  <dir>  use directory <dir>'
     echo '         -dc Maximise derivative (not integral) causality'
     echo '         -dc Maximise derivative (not integral) causality'
     echo '         -i implicit   Use implicit integration'
     echo '         -i euler      Use Euler integration'
+    echo '         -o  ode is same as dae'
     echo '         -p  print environment variables'
     echo '         -r  reset time stamp on representation'
     echo '         -s  try to generate sensitivity BG (experimental)'
     echo '         -ss use steady-state info to initialise simulations'
     echo '         -stdin read input data from standard input for  simulations'
@@ -2027,11 +2031,11 @@
 #SUMMARY obs	observer equations for CGPC (ps)
 #Observer functions for GPC
 $1_obs.r: $1_ode.r $1_def.r $1_obspar.r $1_subs.r
 	ode2obs_r $1; tidy $1_obs.r
 $1_obs.m: $1_def.r $1_sympars.txt $1_obs.r $1_obspar.r $1_numpar.m
-	obs_r2m $1; #matlab_tidy $1_obs.m
+	mtt_r2m $1 obs
 $1_obs.tex: $1_obs.r  $1_sympar.r $1_simp.r
 	obs_r2tex $1; latex_tidy $1_obs.tex
 
 
 #SUMMARY rfe	robot-form equations (r)
@@ -2410,11 +2414,11 @@
 	echo Creating $1_odes.dat
 	dat22dat $1 odes
 
 #Generic conversion of data files from dat to (gplot) gdat format 
 $1_$2.gdat: $1_$2.dat $1_struc.txt  $1_args.m
-	dat2gdat $1 $2 $4 $NyquistStyle
+	dat2gdat $1 $2 "$4" "$NyquistStyle"
 
 #Generic conversion of Latex to latex document
 mtt.sty:
 	echo Copying mtt.sty to here
 	cp $MTTPATH/trans/mtt.sty .