function structure = cbg2ese(system_name, system_type, system_cr, ...
    system_args, full_name, full_name_repetition, ...
    repetition,...
    structure, structure_file, infofile)
% Set up globals to count the component inputs and outputs. This relies on
% the named SS (the ports) being in the correct order. Using globals here
% avoids changing the common argument list for all _eqn files for something
% which is only used for named SS components.
global local_u_index
global local_y_index
global at_top_level
% 
%     %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 
%     %%%%% Model Transformation Tools %%%%%
%     %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% 
% Matlab function  cbg2ese.m
% Acausal bond graph to causal bond graph: mfile format
% Structure matrix [states,nonstates,inputs,outputs,zero_outputs]

% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% %% Version control history
% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% %% $Id$
% %% $Log$
% %% Revision 1.19  1998/04/12 11:58:19  peterg
% %% Rename port components by changing name_r to [name_r
% %%
% %% Revision 1.18  1998/04/11 18:59:16  peterg
% %% at_top_level now global - passed to SS components
% %%
% %% Revision 1.17  1998/04/04 10:47:31  peterg
% %% Uses (coerced) components from _cbg file - _abg not now used here.
% %%
% %% Revision 1.16  1998/03/06 09:38:58  peterg
% %% Now writes correct structure file for multiport C & I
% %%
% %% Revision 1.15  1997/12/16 18:24:33  peterg
% %% Added unknown_input to structure list
% %%
% %% Revision 1.14  1997/08/26 07:51:10  peterg
% %% Now counts the local input and outputs by order of appearence rather
% %% than by port number - it therfore handles ports with bicausality correctely.
% %%
% %% Revision 1.13  1997/05/19 16:45:56  peterg
% %% Fixed ISW bug -- deleted spurious ISW_eqn.m file
% %%
% %% Revision 1.12  1997/04/15  09:17:26  peterg
% %% Added the structure file - contains details of states etc.
% %% 
% %% Revision 1.11  1996/12/07 18:20:11  peterg
% %% Replaces null argument by a default and tells user.
% %%
% %% Revision 1.10  1996/12/07 17:37:07  peterg
% %% Now handles numbered SS ports appearing at top level.
% %%
% %% Revision 1.9  1996/12/04 21:49:47  peterg
% %% Compares full-name with empty string (instead of testing for zero
% %% length)
% %%
% %% Revision 1.8  1996/08/30  16:36:08  peter
% %% More info written to ese files.
% %%
% %% Revision 1.7  1996/08/30 11:23:13  peter
% %% Argument substitution implemented.
% %%
% %% Revision 1.6  1996/08/27  08:04:52  peterg
% %% Handles complex components and repetative components.
% %%
% %% Revision 1.5  1996/08/24  15:02:23  peter
% %% Writes `END;' to keep reduce happy.
% %%
% %% Revision 1.4  1996/08/19 09:03:41  peter
% %% Handles repeating components.
% %%
% %% Revision 1.3  1996/08/18 20:08:02  peter
% %% Included additional structure: structure(5) = zero_outputs.
% %%
% %% Revision 1.2  1996/08/08 18:08:11  peter
% %% Sorted out file naming sceme
% %%
% %% Revision 1.1  1996/08/08 15:53:23  peter
% %% Initial revision
% %%
% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

system_name, system_type, full_name,

pc = '%';

% Set up the names corresponding to the structure matrix.
structure_name = [
  'state        ',
  'nonstate     ',
  'input        ',
  'output       ',
  'zero_output  ',
  'unknown_input'];

	
% Are we at the top level of the heirarchy?
at_top_level = strcmp(full_name, '');

% Create the (full) system name
if at_top_level
  full_name = system_name;
  full_name_repetition = system_name;
  system_type = system_name;
else
  full_name = [full_name, '_', system_name];
  full_name_repetition = [full_name_repetition, ...
	'_', system_name, '_', num2str(repetition)];
end;


% $$$ full_name_type = [full_name, '_', system_type];
% $$$ cbg_name = [full_name_type, '_cbg'];
cbg_name = [full_name, '_cbg'];
% Return if cbg file doesn't exist
if exist(cbg_name)~=2
  disp([cbg_name, ' does not exist']);
  return
end;

% Setup files
ese_name = [full_name_repetition, '_ese.r'];
ese_file = fopen(ese_name, 'w');

fprintf(ese_file, '\n%s%s Equation file for system %s (file %s)\n', ...
    pc, pc, full_name_repetition, ese_name);
fprintf(ese_file, '%s%s Generated by MTT\n\n', pc, pc);

% Evaluate the system function to get the bonds
  eval(['[bonds,status,system_type,components] = ', cbg_name, ';']);
  abg_name = [system_type, '_abg'];
  cmp_name = [system_type, '_cmp'];
  alias_name = [system_type, '_alias'];

% No longer needed - cbg now has components:  
%  eval(['[junk,components]=', abg_name, ';']);

  % Find number of bonds
  [n_bonds,columns] = size(bonds);
  if (columns ~= 2)&(n_bonds>0)
    error('Incorrect bonds matrix: must have 2 columns');
  end;

  % Find number of components
  [n_components,columns] = size(components);
  n_components = n_components
  
  % Set up the first dummy bond number - needed for repetative components
  next_bond = max(max(abs(components)))+1;

  % Set up the counters for the labelled SS. These are, by definition,
  % encountered first and so the counters will not be messed up by subsystems.
  local_u_index = 0;
  local_y_index = 0;
  
  for i = 1:n_components
    comp = nozeros(components(i,:));
    bond_list = abs(comp);
    direction = sign(comp)'*[1 1];
    % Convert from arrow orientated to component orientated causality
    comp_bonds = bonds(bond_list,:).*direction;

disp('---- Component ---');    
    % Get the component details
    eval([ '[comp_type,comp_name,cr,args,repetitions] = ', cmp_name, '(i)' ...
	  ]);
						   
    % Alias the args list
    eval([ "alias = ", alias_name ";"]);
    if is_struct(alias)
      if length(args>0)
        Args = split(args,";"); args="";
        [N,M]= size(Args);
        for i=1:N
           arg = deblank(Args(i,:));
          _arg = strrep(arg,",","__");
          if struct_contains(alias,_arg)
            eval(["new_arg = alias.", _arg, ";"]);
  	    mtt_info(["Replacing ", arg, "\t by ",\
            new_arg, " for component ", comp_name,\
            " (", comp_type,") within ", full_name]);
            arg = new_arg;
          end
          args = sprintf("%s;%s", args, arg);
        end
        args = substr(args,2); % loose leading ;
      end
    end;

    % Substitute positional ($1 etc) arguments
    cr = subs_arg(cr,system_cr, ...
	'lin',full_name,comp_type,comp_name);
    args = subs_arg(args,system_args, ...
	'1',full_name,comp_type,comp_name);
    
    % change name of 0 and 1 components -- matlab doesn't like numbers here
    if strcmp(comp_type,'0')
      comp_type = 'zero';
    end;
    if strcmp(comp_type,'1')
      comp_type = 'one';
    end;
    
    ports = length(bond_list);
    
    if repetitions>1
      port_pairs = ports/2;
      if round(port_pairs)~=port_pairs;
	mtt_info(['Repeated component ', comp_name, ...
	      ' has an odd number of ports - ignoring repetitions']);
	repetitions = 1;
      end;
    end;
    
    if repetitions>1
      odd_bonds = bond_list(1:2:ports-1);
      even_bonds = bond_list(2:2:ports);
    end;
    
    for k = 1:repetitions
      
      if repetitions>1
	
	if k==1
	  bond_list(1:2:ports-1) = odd_bonds;
	else
	  bond_list(1:2:ports-1) = bond_list(2:2:ports);
	end;
	
	if k==repetitions
	  bond_list(2:2:ports) = even_bonds;
	else
	  new_bonds = [next_bond:next_bond+port_pairs-1];
	  next_bond = next_bond+port_pairs;
	  bond_list(2:2:ports) = new_bonds;
	end;
	
      end;
	
      % Invoke the appropriate equation-generating procedure
      name_r = full_name_repetition;
      eqn_name = [comp_type, '_eqn']
      
      if exist(eqn_name)~=2 % Try a compound component
	disp('---PUSH---');
	structure = cbg2ese(comp_name, comp_type, cr, args, ...
	    full_name, full_name_repetition, ...
	    k, structure,  structure_file, infofile);
	
	% Link up the bonds
	fprintf(ese_file, ...
	    '\n\t%s Equations linking up subsystem %s (%s)\n\n', ...
	    pc, comp_name, comp_type);
	name_comp_name = sprintf('%s_%s_%d', ...
	    full_name_repetition, comp_name, k);
	
	u_index = 0; y_index = 0; % Count the inputs and outputs
	for port_number=1:length(bond_list)
	  % Effort
	  if comp_bonds(port_number,1)==1 % Source
	     u_index = u_index + 1;
	     fprintf(ese_file, '%s_MTTu%d := %s;\n', ...
		 name_comp_name, u_index, varname(name_r, ...
		 bond_list(port_number),1));
	   else % Sensor
	     y_index = y_index + 1;
	     fprintf(ese_file, '%s := %s_MTTy%d;\n', ...
		 varname(name_r, ...
		 bond_list(port_number),1), name_comp_name, y_index);
	  end;
	  % Flow
	  if comp_bonds(port_number,2)==-1 % Source
	     u_index = u_index + 1;
	     fprintf(ese_file, '%s_MTTu%d := %s;\n', ...
		 name_comp_name, u_index, varname(name_r, ...
		 bond_list(port_number),-1));
	   else % Sensor
	     y_index = y_index + 1;
	     fprintf(ese_file, '%s := %s_MTTy%d;\n', ...
		 varname(name_r, ...
		 bond_list(port_number),-1), name_comp_name, y_index);
	   end;	
	 end;
	
	disp('---POP---');
      else % its a simple component
	fprintf(ese_file, '\n\t%s Equations for component %s (%s), repetition %d\n\n', ...
	    pc, comp_name, comp_type,k);
	
	 
	% Is it a named port? (Name begins with [)
        Named_Port = (comp_name(1)=='[');

       if Named_Port %Add [ to start of name
	 name_r = ['[' name_r];
       end;

#	% Take port SS to be ordinary SS at top level
#	if at_top_level & strcmp(comp_type, 'SS') 
#	  effort_attribute = cr;
#	  flow_attribute = args;
#	  if strcmp(effort_attribute, 'MTT_port') % Its a numbered port
#	    effort_attribute = 'external';
#	    flow_attribute = 'external';
#	    cr = effort_attribute;
#	    args = flow_attribute;
#	  end;
#	end;

	% Save the current structure
	old_structure = structure;
	
	% Generate the simple component equations
	eval(['structure = ', ...
	      eqn_name, ...
	      '(name_r,bond_list,comp_bonds, ...
	      direction,cr,args,structure,ese_file);' ]);
      
	% If structure has changed, write info to structure file.
	structure_change = structure-old_structure;
	
	% The following line is to avoid probs with multiport C or I
	% it needs changing to handle multi ports correctly
	structure_changes = sum(structure_change);
	
	structure_change = structure_change>zeros(size(structure_change));
 	if structure_changes>0
 	  which_indices = getindex(structure_change,1);
 	  which_indices = which_indices(:,2)';
 	  for which_index=which_indices
 	    value = structure(which_index);
	    value_change=value-old_structure(which_index);
	    for k=1:value_change
	      fprintf(structure_file, ...
		  '%s\t%1.0f\t%s\t%s\t%1.0f\n', ...
		  structure_name(which_index,:), value-k+1, ...
		  comp_name, full_name, repetition);
	      end;
 	    end;
 	  end;
	
      end;
    end;
  end;

  % Close the files
  fclose(ese_file);