Artifact [138ae021cc]

Artifact 138ae021cc560f7bc5e7b4d93b01fbb612d50b74:


#! /bin/env bash
# ypkg package install script for R-2.15.2-BioCann

pkg_init () {
	acquire R_packages--R-2.15.2
	name=R-2.15.2-BioCann
	R_LIBS="/grid/gro/vol/rstat-data/bioconductor/$biocvers${R_LIBS+:$R_LIBS}"
	R_REPOS=( http://bioconductor.org/packages/$biocvers/data/annotation )
	if test ! -e "$sdir/../etc/BioC-$biocvers-ann"; then
		printf '%s\n' "annotation package list not found at $sdir/../etc/BioC-$biocvers-ann" >&2
		exit 1
	fi
	R_PACKAGES=(
		$(cat "$sdir/../etc/BioC-$biocvers-ann" )
	)
	#make_install=( packages_bioc )

}